VfoldLA offers a user-friendly approach to the fully automated prediction of RNA 3D structures with given sequences and 2D structures. The method is based on the assembly of A-form helices with loop templates extracted from known RNA 3D structures.

Due to the limitation of the current loop template library, VfoldLA may give no predictions.

Submit a new job:
(1) Input sequence and 2D structure in dot-bracket format (Use "-" to separate RNA strands for RNA complex systems (up to 10 strands)):

(2) Number of clusters (<=5):

(3) RMSD cut_off ( in ) for clustering (<=10 ):

(4) Job name (alphanumeric characters only):

(5) Your email address (optional, you will receive the results by email, if provided):

Reference for VfoldLA:

[1] Xu X, Chen S-J. (2017) RNA three-dimensional structure prediction using hierarchical loop template assembly.

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